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Bagels are a breakfast staple, but traditional bagels can be carb-heavy and lacking in protein. If you’re looking for a nutrient-packed alternative that doesn’t sacrifice taste, these protein bagels made in the air fryer are the perfect solution. They are light, fluffy, and packed with over 10 grams of protein per serving, making them a great choice for anyone wanting a high-protein breakfast or snack.
Unlike traditional bagels that require yeast and a long proofing process, this quick and easy recipe uses just three main ingredients: cottage cheese, flour, and baking powder. The cottage cheese adds moisture and protein, while the baking powder helps them rise without needing yeast. The result? A soft, slightly chewy bagel with a crisp golden crust, ready in under 30 minutes.
If you’ve never made bagels before, don’t worry—this recipe is beginner-friendly. No kneading machines or long waiting times are required. Plus, the air fryer method makes them even easier and faster to prepare than baking in the oven.
Why You’ll Love These Protein Bagels
1. High in Protein, Low in Effort
Each bagel contains around 10 grams of protein, thanks to the cottage cheese. This makes them a great post-workout snack, breakfast option, or meal-prep staple for those looking to boost their protein intake.
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2. No Yeast or Proofing Needed
Traditional bagels require yeast, kneading, and long proofing times. These protein bagels come together in minutes without any waiting time, making them perfect for busy mornings.
3. Air Fryer Convenience
Using an air fryer speeds up the cooking process, giving the bagels a crispy, golden exterior without the need for boiling or baking. If you don’t have an air fryer, they can also be baked in the oven with excellent results.
4. Gluten-Free and Dairy-Free Options
With a simple swap of gluten-free flour, these bagels can be made entirely gluten-free. Although this recipe relies on cottage cheese for protein, there are dairy-free alternatives available for those who need them.
5. Customizable with Endless Topping Options
Bagels are a blank canvas—you can keep them simple or load them up with your favorite flavors. Whether you love everything seasoning, sesame seeds, or shredded cheese, these bagels can be tailored to your taste.
Ingredients:
For the Bagel Dough:
- All-purpose flour (or gluten-free alternative)
- Baking powder
- Salt (optional)
- Cottage cheese (2% or 4%)
For Topping and Finishing:
- Egg wash (whisked egg with a splash of water)
- Toppings (everything seasoning, sesame seeds, poppy seeds, shredded asiago cheese)
Directions:
1. Prepare the Dough:
- Mix the flour, baking powder, and salt in a bowl.
- Add cottage cheese and stir until a rough dough forms.
2. Knead and Shape:
- Transfer the dough to a floured surface and knead for 1-2 minutes until smooth.
- Divide into four equal portions, roll into logs, and shape into bagels.
3. Add the Finishing Touches:
- Brush each bagel with the egg wash to enhance color and help toppings stick.
- Sprinkle with everything seasoning, sesame seeds, or cheese, if desired.
4. Cook to Perfection:
For the Air Fryer:
- Preheat to 300°F and cook for 15-17 minutes until golden brown.
For the Oven:
- Bake at 375°F for 20-25 minutes on a parchment-lined baking sheet.
5. Cool and Serve:
- Let the bagels rest for at least 15 minutes before slicing and enjoying.
Nutritional Information (Per Bagel):
- Calories: ~170 kcal
- Protein: ~10g
- Carbohydrates: ~28g
- Fat: ~2g
- Fiber: ~1g
- Sodium: ~250mg

How to Customize Your Protein Bagels
One of the best things about these bagels is how easy they are to modify based on your preferences. Here are some customization ideas to make them even more delicious:
1. Change Up the Flour
- Whole Wheat Flour: For extra fiber and a more hearty texture.
- Gluten-Free Flour: Use Cup4Cup or another gluten-free blend for a wheat-free option.
- Almond Flour: A low-carb alternative that works best when mixed with another flour for stability.
2. Boost the Protein Even More
- Add an Egg White: This increases protein content while helping the dough bind better.
- Mix in Protein Powder: A neutral or vanilla-flavored protein powder can give an extra boost.
3. Experiment with Toppings
- Everything Bagel Seasoning: A classic blend of sesame seeds, garlic, onion, and poppy seeds.
- Sesame or Poppy Seeds: Adds a subtle crunch and nutty flavor.
- Cheese Topping: Sprinkle shredded asiago, parmesan, or cheddar before air frying.
- Cinnamon Sugar: For a sweeter take, brush with egg wash and sprinkle with cinnamon and sugar.
4. Get Creative with Fillings
Want to take these bagels to the next level? Try stuffing them with cream cheese, shredded cheese, or even peanut butter before shaping them for an unexpected twist.
Best Ways to Enjoy Protein Bagels
These bagels are great on their own, but you can also use them as a base for creative meals and snacks. Here are a few ideas:
1. High-Protein Breakfast Sandwich
Slice a bagel in half, toast it, and add:
- Scrambled eggs
- Turkey bacon or smoked salmon
- Avocado slices
- A sprinkle of everything seasoning
2. Open-Faced Bagel Pizzas
Top a sliced bagel with:
- Tomato sauce
- Mozzarella cheese
- Pepperoni or veggies
- Air fry at 350°F until the cheese is bubbly.
3. Sweet Bagel Treat
Spread with:
- Almond butter or peanut butter
- Banana slices and a drizzle of honey
- A sprinkle of chia seeds for added nutrition
4. Bagel Chips for Snacking
Slice the bagels into thin rounds, brush with olive oil, and air fry at 350°F until crispy. These make excellent homemade bagel chips for dipping into hummus or guacamole.
Frequently Asked Questions (FAQs)
1. Can I Make These Bagels Without an Air Fryer?
Yes! Simply bake them in the oven at 375°F for 20-25 minutes until golden brown. The air fryer just makes the process faster and gives a crispier crust.
2. How Do I Store Leftover Bagels?
- Refrigerator: Store in an airtight container for up to 5 days.
- Freezer: Freeze in a sealed bag for up to 3 months. To reheat, toast in the air fryer or oven until warm.
3. Are These Bagels Low-Carb?
Not as written, but you can make them lower in carbs by using a combination of almond flour and coconut flour instead of all-purpose flour.
4. Can I Use Greek Yogurt Instead of Cottage Cheese?
Yes! Greek yogurt works well, but cottage cheese provides more protein and a fluffier texture. If using Greek yogurt, make sure it’s thick and full-fat for the best results.
5. What’s the Best Way to Reheat Them?
- Air Fryer: 330°F for 3-5 minutes.
- Toaster: Toast until warm and crispy.
- Microwave: 30 seconds, but this may make them softer.
6. How Can I Make These Bagels Even Crispier?
- Brush with egg wash before cooking.
- Use a little extra baking powder for more rise.
- Cook a few extra minutes in the air fryer at a slightly higher temperature.
Conclusion: A Bagel That Works for You
These high-protein air fryer bagels prove that you don’t have to choose between health and flavor. Whether you’re looking for a quick breakfast, an easy snack, or a satisfying post-workout meal, this simple recipe delivers big on nutrition and taste.
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With only a few ingredients, minimal prep, and a short cook time, they are perfect for meal prepping or making fresh in the morning. Plus, with customizable toppings and fillings, you can make them exactly how you like.
So, whether you’re aiming to increase your protein intake, find a healthier alternative to store-bought bagels, or just try something new, these air fryer protein bagels are a must-try addition to your kitchen routine.
Give them a try, and enjoy a delicious, protein-packed bagel that keeps you full and energized all day!